FCGP
Fusarium Comparative Genomics Platform
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INTRODUCTION
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GENOMES
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TRANSCRIPTION FACTORS
|
CYTOCHROME P450
|
SECRETOME
|
PILOT STUDIES
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TOOLS
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GATEWAY
Introduction to the FCGP
Components of CiF
Genome Browser
ORFs of
F.ver
(3A)
ORFs of
F.oxy
(2A)
ORFs of
F.gra
(3A)
ORFs of
F.sol
(2)
TF Families
Transcription Factors
Unique TFs
TF Summary
P450 Class Browser
P450 Sequence Browser
Species Browser
OrthoMCL Clustering
MLST Genomics
Favorite Browser
BLAST Search
CiF
Community Platform
Fusarium-ID
HOME
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FUSARIUM ISOLATE DATABASE
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LIST OF FUSARIUM SEQUENCES
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Marker Option
All available markers
18
18s rDNA 141bp
28s rDNA 629bp
64
Actin
Ammonia Ligase 1345 bp
Ammonia Ligase 557 bp
Beta Tubulin 579 bp
Beta Tubulin 592bp
Beta Tubulin-121 291 bp
Beta Tubulin-121 348 bp
Beta Tubulin-222 318 bp
Beta Tubulin-222 463 bp
Beta-tublin
Calmodulin
COI
EF-IGS
EF-rDNA-RPB2
Elongation Factor 1
Glyceraldehyde-3-phosphate dehydrogenase
Histone
Histone 3
IGS Sequence
ITS 503 bp + 28S rDNA 631 bp = 1134 bp
ITS rDNA 493bp
MAT 6159 bp
Mitochondrial cox1 locus
Mitochondrial NADH Dehydrogenase Subunit 1
Mitochondrial NADH Dehydrogenase Subunit 9
Mitochondrial oxaloacetate transport protein
Mitochondrial Ribosomal Protein S10
Mitochondrial Sec-Independent Transporter Protein
mtSSU
ND1
ND6
NL 535bp
Phosphate Permase
Phosphate Permase 552 bp
Pr9C3
PrMS39
PrMS43
PrMS45
PrMS6
rDNA
rDNA IGS 1952 bp
rDNA IGS 2733 bp
rDNA ITNL 1135bp
rDNA ITNL 1153bp
Reductase 1154 bp
RPB1
RPB2
RPB2 57
RPB2 711
TEF1(v.3.0)
Tri101 - AT 1336 bp
Tryptophan synthase
TUB Paralog
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